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No more use of _ to mark private variables.

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This commit is contained in:
Jens True
2023-08-01 14:02:12 +00:00
parent c8c126962d
commit f0aa9413e1
8 changed files with 87 additions and 94 deletions
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84
src/Numerics/GaussianDistribution.php
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@@ -12,65 +12,65 @@ class GaussianDistribution implements \Stringable
{
// precision and precisionMean are used because they make multiplying and dividing simpler
// (the the accompanying math paper for more details)
private $_precision;
private $precision;
private $_precisionMean;
private $precisionMean;
private $_variance;
private $variance;
public function __construct(private float $_mean = 0.0, private float $_standardDeviation = 1.0)
public function __construct(private float $mean = 0.0, private float $standardDeviation = 1.0)
{
$this->_variance = BasicMath::square($_standardDeviation);
$this->variance = BasicMath::square($standardDeviation);
if ($this->_variance != 0) {
$this->_precision = 1.0 / $this->_variance;
$this->_precisionMean = $this->_precision * $this->_mean;
if ($this->variance != 0) {
$this->precision = 1.0 / $this->variance;
$this->precisionMean = $this->precision * $this->mean;
} else {
$this->_precision = \INF;
$this->precision = \INF;
$this->_precisionMean = $this->_mean == 0 ? 0 : \INF;
$this->precisionMean = $this->mean == 0 ? 0 : \INF;
}
}
public function getMean(): float
{
return $this->_mean;
return $this->mean;
}
public function getVariance(): float
{
return $this->_variance;
return $this->variance;
}
public function getStandardDeviation(): float
{
return $this->_standardDeviation;
return $this->standardDeviation;
}
public function getPrecision(): float
{
return $this->_precision;
return $this->precision;
}
public function getPrecisionMean(): float
{
return $this->_precisionMean;
return $this->precisionMean;
}
public function getNormalizationConstant(): float
{
// Great derivation of this is at http://www.astro.psu.edu/~mce/A451_2/A451/downloads/notes0.pdf
return 1.0 / (sqrt(2 * M_PI) * $this->_standardDeviation);
return 1.0 / (sqrt(2 * M_PI) * $this->standardDeviation);
}
public function __clone()
{
$result = new GaussianDistribution();
$result->_mean = $this->_mean;
$result->_standardDeviation = $this->_standardDeviation;
$result->_variance = $this->_variance;
$result->_precision = $this->_precision;
$result->_precisionMean = $this->_precisionMean;
$result->mean = $this->mean;
$result->standardDeviation = $this->standardDeviation;
$result->variance = $this->variance;
$result->precision = $this->precision;
$result->precisionMean = $this->precisionMean;
return $result;
}
@@ -78,17 +78,17 @@ class GaussianDistribution implements \Stringable
public static function fromPrecisionMean(float $precisionMean, float $precision): self
{
$result = new GaussianDistribution();
$result->_precision = $precision;
$result->_precisionMean = $precisionMean;
$result->precision = $precision;
$result->precisionMean = $precisionMean;
if ($precision != 0) {
$result->_variance = 1.0 / $precision;
$result->_standardDeviation = sqrt($result->_variance);
$result->_mean = $result->_precisionMean / $result->_precision;
$result->variance = 1.0 / $precision;
$result->standardDeviation = sqrt($result->variance);
$result->mean = $result->precisionMean / $result->precision;
} else {
$result->_variance = \INF;
$result->_standardDeviation = \INF;
$result->_mean = \NAN;
$result->variance = \INF;
$result->standardDeviation = \INF;
$result->mean = \NAN;
}
return $result;
@@ -98,15 +98,15 @@ class GaussianDistribution implements \Stringable
// for multiplication, the precision mean ones are easier to write :)
public static function multiply(GaussianDistribution $left, GaussianDistribution $right): self
{
return GaussianDistribution::fromPrecisionMean($left->_precisionMean + $right->_precisionMean, $left->_precision + $right->_precision);
return GaussianDistribution::fromPrecisionMean($left->precisionMean + $right->precisionMean, $left->precision + $right->precision);
}
// Computes the absolute difference between two Gaussians
public static function absoluteDifference(GaussianDistribution $left, GaussianDistribution $right): float
{
return max(
abs($left->_precisionMean - $right->_precisionMean),
sqrt(abs($left->_precision - $right->_precision))
abs($left->precisionMean - $right->precisionMean),
sqrt(abs($left->precision - $right->precision))
);
}
@@ -118,12 +118,12 @@ class GaussianDistribution implements \Stringable
public static function logProductNormalization(GaussianDistribution $left, GaussianDistribution $right): float
{
if (($left->_precision == 0) || ($right->_precision == 0)) {
if (($left->precision == 0) || ($right->precision == 0)) {
return 0;
}
$varianceSum = $left->_variance + $right->_variance;
$meanDifference = $left->_mean - $right->_mean;
$varianceSum = $left->variance + $right->variance;
$meanDifference = $left->mean - $right->mean;
$logSqrt2Pi = log(sqrt(2 * M_PI));
@@ -133,23 +133,23 @@ class GaussianDistribution implements \Stringable
public static function divide(GaussianDistribution $numerator, GaussianDistribution $denominator): self
{
return GaussianDistribution::fromPrecisionMean(
$numerator->_precisionMean - $denominator->_precisionMean,
$numerator->_precision - $denominator->_precision
$numerator->precisionMean - $denominator->precisionMean,
$numerator->precision - $denominator->precision
);
}
public static function logRatioNormalization(GaussianDistribution $numerator, GaussianDistribution $denominator): float
{
if (($numerator->_precision == 0) || ($denominator->_precision == 0)) {
if (($numerator->precision == 0) || ($denominator->precision == 0)) {
return 0;
}
$varianceDifference = $denominator->_variance - $numerator->_variance;
$meanDifference = $numerator->_mean - $denominator->_mean;
$varianceDifference = $denominator->variance - $numerator->variance;
$meanDifference = $numerator->mean - $denominator->mean;
$logSqrt2Pi = log(sqrt(2 * M_PI));
return log($denominator->_variance) + $logSqrt2Pi - log($varianceDifference) / 2.0 +
return log($denominator->variance) + $logSqrt2Pi - log($varianceDifference) / 2.0 +
BasicMath::square($meanDifference) / (2 * $varianceDifference);
}
@@ -258,6 +258,6 @@ class GaussianDistribution implements \Stringable
public function __toString(): string
{
return sprintf('mean=%.4f standardDeviation=%.4f', $this->_mean, $this->_standardDeviation);
return sprintf('mean=%.4f standardDeviation=%.4f', $this->mean, $this->standardDeviation);
}
}